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Ā
Beneficial (Commensal) Bacteria
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Bifidobacterium spp.
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Lactobacillus spp.
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Akkermansia muciniphila
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Faecalibacterium prausnitzii
Opportunistic / Overgrowth Bacteria
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Bacillus spp.
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Enterococcus faecalis
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Enterococcus faecium
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Morganella spp.
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Pseudomonas spp.
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Streptococcus spp.
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Staphylococcus spp.
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Desulfovibrio piger
Pathogenic Bacteria
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Campylobacter spp.
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Clostridioides difficile (toxin A & B)
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Enterohemorrhagic E. coli
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Enteropathogenic E. coli (EPEC)
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Enterotoxigenic E. coli (ETEC)
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Shiga-like toxinā€“producing E. coli
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Salmonella spp.
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Shigella spp.
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Vibrio spp.
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Yersinia enterocolitica
Parasites (Protozoa & Helminths)
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Blastocystis hominis
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Cryptosporidium spp.
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Cyclospora cayetanensis
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Dientamoeba fragilis
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Entamoeba histolytica
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Giardia lamblia
Fungi / Yeast
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Candida albicans
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Candida glabrata
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Candida krusei
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Candida parapsilosis
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Candida tropicalis
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Geotrichum spp.
Viruses
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Adenovirus 40/41
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Norovirus GI/GII
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Rotavirus A
Inflammation & Immune Markers
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Calprotectin (intestinal inflammation)
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Secretory IgA (mucosal immune function)
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Anti-gliadin IgA (gluten-related immune response)
Digestive Function Markers
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Pancreatic elastase-1 (pancreatic enzyme output)
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Steatocrit (fat malabsorption)
Detoxification & Metabolic Markers
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Beta-glucuronidase (estrogen, toxin, and hormone recycling)
Overall Gut Health Patterns
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Dysbiosis (microbial imbalance)
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Low beneficial bacteria
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Pathogen burden
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Immune activation
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Inflammatory signaling
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Digestive insufficiency
